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Dataset ID

JGAD000475

Type of data: NGS (WGS)
Access criteria: Controlled-access (Type I)
Total data volume: 201 GB
File formats: FASTQ
Research: hum0306
Date published: 2021-11-02
Date modified: 2021-11-02
DDBJ Search: JGAD000475 (opens in a new tab)
JGA Study: JGAS000361 (opens in a new tab)

Analysis method

WGS

Materials and participants: liver cancer (ICD10: C220): 9 cases; Health status
Affected
Subject count
9 (Individual)
Disease: liver cancer (C220)
Sample description: DNAs extracted from tumor tissues; Tumor / normal
Tumor
Sample provider: N/A
Experimental method: WGS
Target: N/A
Reagent kit: Ligation Sequencing Kit (SQK-LSK109)
Fragmentation: N/A
Platform: Oxford Nanopore Technologies MinION
Read type: Single-end
Read length: 7875 bp (Mean)
4715–12,070 bp (Range)
Data use policy: NBDC data sharing policy (JGAP000001)