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Dataset ID

JGAD000416

Type of data: NGS (scRNA-seq)
Access criteria: Controlled-access (Type I)
Total data volume: 333 GB
File formats: FASTQ
Research: hum0278
Date published: 2022-07-19
Date modified: 2022-07-19
DDBJ Search: JGAD000416 (opens in a new tab)
JGA Study: JGAS000305 (opens in a new tab)

Analysis method

scRNA-seq

Materials and participants: Breast cancer (ICD10: C509): 4 cases
cancer stem cells: 11 samples
(cancer stem cells); Health status
Affected
Subject count
4 (Individual)
Disease: Breast cancer (C509)
Sample description: RNAs extracted from sorted breast cancer stem cells; Tumor / normal
Tumor
Sample provider: N/A
Experimental method: scRNA-seq
Target: N/A
Reagent kit: Nextera XT DNA Library Prep Kit
Fragmentation: Tagmentation (Nextera XT DNA Sample Preparation Kit)
Platform: Illumina HiSeq 3000
Read type: Mixed
Read length: 50 bp (SR)
200 bp (Total PE (100PE))
Data use policy: NBDC data sharing policy (JGAP000001)