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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000415

Type of data
NGS (Exome)
Access criteria
Controlled-access (Type I)
Total data volume
199 GB
File formats
  • FASTQ
Research
hum0278
Date published
2022-07-19
Date modified
2022-07-19
DDBJ Search
JGAD000415 (opens in a new tab)
JGA Study
JGAS000304 (opens in a new tab)

Analysis method

WES

Materials and participants
Breast cancer (ICD10: C509): 5 cases
cancer stem cells and non-cancer stem cells: 12 samples
  • Health status
    Affected
  • Subject count
    5 (Individual)
Disease
Breast cancer (C509)
Sample description
DNAs extracted from breast cancer cells sorted into cancer stem cells and non-cancer stem cells
  • Tissue
    Breast cancer non-stem cell, Breast cancer stem cell
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
SureSelect Human All Exon V5
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 3000
Illumina NovaSeq 6000
Read type
Paired-end
Read length
HiSeq: 200 bp (Total PE (100PE))
NovaSeq: 300 bp (Total PE (150PE))
Data use policy
NBDC data sharing policy (JGAP000001)