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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000411

Type of data
NGS (Amplicon-seq)
Access criteria
Controlled-access (Type I)
Total data volume
7.1 GB
File formats
  • BAM
Research
hum0273
Date published
2021-08-18
Date modified
2021-08-18
DDBJ Search
JGAD000411 (opens in a new tab)
JGA Study
JGAS000300 (opens in a new tab)

Analysis method

RNA Amplicon-seq

Materials and participants
lobular carcinoma in situ with ductal carcinoma in situ (ICD10: C509): 2 cases
tumor tissues: 6 samples, non-tumor tissues: 3 samples
  • Health status
    Affected
  • Subject count
    2 (Individual)
Disease
lobular carcinoma in situ with ductal carcinoma in situ (C509)
Sample description
DNAs extracted from tumor tissues and non-tumor tissues
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
Amplicon-seq
Target
409 genes (Ion Ampliseq Comprehensive Cancer Panel)
Reagent kit
Ion Xpress Barcode Adapters
Fragmentation
PCR amplification
Platform
Thermo Fisher Scientific Ion Proton
Read type
Single-end
Read length
100–300 bp
Data use policy
NBDC data sharing policy (JGAP000001)