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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000402

Type of data
NGS (Exome, RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
80.7 GB
File formats
  • FASTQ
Research
hum0269
Date published
2021-05-24
Date modified
2021-05-24
DDBJ Search
JGAD000402 (opens in a new tab)
JGA Study
JGAS000295 (opens in a new tab)

Analysis method

WES

Materials and participants
hereditary cardiovascular disease (ICD10: I42): 10 + 20 cases
  • Health status
    Affected
  • Subject count
    30 (Individual)
Disease
  • hereditary cardiovascular disease
Sample description
DNAs extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
SureSelect Human All Exon V6
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 3000
Read type
Paired-end
Read length
100 bp
Data use policy
NBDC data sharing policy (JGAP000001)
No use by private-sector companies (JGAP000003)

RNA-seq

Materials and participants
hereditary cardiovascular disease (ICD10: I42): 3 cases
  • Health status
    Affected
  • Subject count
    3 (Individual)
Disease
  • hereditary cardiovascular disease
Sample description
RNAs extracted from myocardial samples at the time of heart transplantation
  • Tissue
    Heart
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
TruSeq Stranded mRNA Library Prep Kit
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2500
Illumina HiSeq 3000
Read type
Paired-end
Read length
100 bp
Data use policy
NBDC data sharing policy (JGAP000001)
No use by private-sector companies (JGAP000003)