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Dataset ID

JGAD000395

Type of data
NGS (scRNA-seq, bulk RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
363 GB
File formats
  • FASTQ
Research
hum0130
Date published
2022-09-15
Date modified
2022-09-15

Analysis method

RNA-seq

Materials and participants
POEMS syndrome (ICD10: C90.2): 4 cases
MM (ICD10: C90.0): 3 cases
Normal control (lymphoma without BM invasion): 2 cases
  • Subject count
    9 (Individual)
Disease
POEMS syndrome (C902)
MM (C900)
Sample description
RNA purified from Plasma cells or buccal cell of POEMS syndrome and normal controls
  • Tissue
    Bone marrow
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Fragmentation
Ultrasonic fragmentation
Platform
Illumina HiSeq 2000
Read type
Single-end
Read length
60 bp

scRNA-seq

Materials and participants
POEMS syndrome (ICD10: C90.2): 11 cases (1 case is also used for JGAD000226)
MM (ICD10: C90.0): 2 cases
MGUS (ICD10: D47.2): 2 cases
Normal control (lymphoma without BM invasion): 2 cases
Disease
POEMS syndrome (C902)
MM (C900)
MGUS (D472)
Sample description
RNA purified from CD138+ plasma cells of POEMS syndrome, MM, MGUS and lymphoma
  • Tissue
    Bone marrow
Sample provider
N/A
Experimental method
scRNA-seq
Target
N/A
Fragmentation
Tagmentation using Nextera XT DNA Sample Preparation kit (Illumina)
Platform
Illumina HiSeq 3000
Read type
Paired-end
Read length
100 bp