Dataset ID
JGAD000395
- Type of data
- NGS (scRNA-seq, bulk RNA-seq)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 363 GB
- File formats
- FASTQ
- Research
- hum0130
- Date published
- 2022-09-15
- Date modified
- 2022-09-15
- DDBJ Search
- JGAD000395 (opens in a new tab)
- JGA Study
- JGAS000289 (opens in a new tab)
Analysis method
RNA-seq
- Materials and participants
- POEMS syndrome (ICD10: C90.2): 4 cases
MM (ICD10: C90.0): 3 cases
Normal control (lymphoma without BM invasion): 2 cases - Subject count9 (Individual)
- Disease
- POEMS syndrome (C902)
MM (C900) - Sample description
- RNA purified from Plasma cells or buccal cell of POEMS syndrome and normal controls
- TissueBone marrow
- Sample provider
- N/A
- Experimental method
- RNA-seq
- Target
- N/A
- Fragmentation
- Ultrasonic fragmentation
- Platform
- Illumina HiSeq 2000
- Read type
- Single-end
- Read length
- 60 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)
scRNA-seq
- Materials and participants
- POEMS syndrome (ICD10: C90.2): 11 cases (1 case is also used for JGAD000226)
MM (ICD10: C90.0): 2 cases
MGUS (ICD10: D47.2): 2 cases
Normal control (lymphoma without BM invasion): 2 cases - Disease
- POEMS syndrome (C902)
MM (C900)
MGUS (D472) - Sample description
- RNA purified from CD138+ plasma cells of POEMS syndrome, MM, MGUS and lymphoma
- TissueBone marrow
- Sample provider
- N/A
- Experimental method
- scRNA-seq
- Target
- N/A
- Fragmentation
- Tagmentation using Nextera XT DNA Sample Preparation kit (Illumina)
- Platform
- Illumina HiSeq 3000
- Read type
- Paired-end
- Read length
- 100 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)