Dataset ID
JGAD000385
- Type of data
- NGS (Exome)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 137 GB
- File formats
- FASTQ
- Research
- hum0216
- Date published
- 2021-04-12
- Date modified
- 2021-04-12
- DDBJ Search
- JGAD000385 (opens in a new tab)
- JGA Study
- JGAS000279 (opens in a new tab)
Analysis method
WES
- Materials and participants
- colorectal cancer (ICD10: C18.9): 7 cases (15 samples)
(matched tumor and non-tumor tissues)
(transverse tumor, sigmoid tumor and matched non-tumor tissues for 1 case) - Health statusAffected
- Subject count7 (Individual)
- Disease
- colorectal cancer (C189)
- Sample description
- DNAs extracted from tumor or non-tumor tissues from colorectal cancer patients
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- NEBNext Ultra DNA Library Prep Kit for Illumina
SureSelect Human All Exon V5 - Fragmentation
- Ultrasonic fragmentation (Covaris)
- Platform
- Illumina NovaSeq 6000
- Read type
- Paired-end
- Read length
- 150 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)