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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000373

Type of data
NGS (RNA-seq: Systemic sclerosis)
Access criteria
Controlled-access (Type I)
Research
hum0214
Date published
2022-03-16
Date modified
2022-03-16
DDBJ Search
JGAD000373 (opens in a new tab)

Analysis method

ATAC-seq

Materials and participants
Systemic Lupus Erythematosus (ICD10: M329): 8 cases
8 healthy controls
  • Health status
    Healthy
Disease
  • Systemic Lupus Erythematosus
Sample description
DNAs extracted from 15 immune cell subsets (Naive_B, SM_B, USM_B, DN_B, Plasmablast, Th1, Th2, Th17, Tfh, Naive_CD4, Mem_CD4, Naive_CD8, CD16p_Mono, CD16n_Mono, NK)
Sample provider
N/A
Experimental method
ATAC-seq
Target
N/A
Reagent kit
Fast-ATAC-seq
Fragmentation
Fast-ATAC-seq protocol
Platform
Illumina HiSeq 2500
Read type
Paired-end
Read length
102 bp
Data use policy
NBDC data sharing policy (JGAP000001)