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Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000349

Type of data: NGS (Exome)
Access criteria: Controlled-access (Type I)
Total data volume: 27.8 GB
File formats: FASTQ
Research: hum0247
Date published: 2021-01-05
Date modified: 2021-01-05
DDBJ Search: JGAD000349 (opens in a new tab)
JGA Study: JGAS000249 (opens in a new tab)

Analysis method

WES

Materials and participants: melanoma (ICD10: C43.3, C43.7): 3 cases
tumor tissue: 3 samples
non-tumor tissue (PBMC): 3 samples; Health status
Affected
Subject count
3 (Individual)
Disease: melanoma (C433, C437)
Sample description: DNAs extracted from tumor tissues and PBMCs of melanoma patients; Tissue
PBMC, Peripheral blood
Tumor / normal
Mixed
Sample provider: N/A
Experimental method: WES
Target: N/A
Reagent kit: SureSelect Human All Exon V6
Fragmentation: Ultrasonic fragmentation (Covaris)
Platform: Illumina HiSeq 1500
Read type: Paired-end
Read length: 100 bp
Reference genome: GRCh37
Data use policy: NBDC data sharing policy (JGAP000001)