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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000348

Type of data
NGS (CAGE-seq)
Access criteria
Controlled-access (Type I)
Total data volume
42.5 GB
File formats
  • FASTQ
  • BAM
Research
hum0249
Date published
2020-09-28
Date modified
2020-11-18
DDBJ Search
JGAD000348 (opens in a new tab)
JGA Study
JGAS000248 (opens in a new tab)

Analysis method

CAGE-seq

Materials and participants
hard tissue/connective tissue related diseases (ICD10: Q870): 3 cases
osteoblast differentiated from iPS cells established from oral mucosa fibroblast: 2 cases (2 samples)
osteoblast differentiated from iPS cells established from oral mucosa fibroblast (mutation-corrected iPS cells by gene editing): 1 case (1 sample)
  • Health status
    Affected
  • Subject count
    3 (Individual)
Disease
hard tissue/connective tissue related diseases (Q870)
Sample description
RNA extracted from osteoblast differentiated from iPS cells
  • Tissue
    Osteoblast
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
CAGE-seq
Target
N/A
Reagent kit
nAnT-iCAGE
Fragmentation
N/A
Platform
Illumina NextSeq 500
Read type
Single-end
Read length
47 bp
Data use policy
NBDC data sharing policy (JGAP000001)