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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000342

Type of data
NGS (Amplicon-seq)
Access criteria
Controlled-access (Type I)
Total data volume
202 GB
File formats
  • FASTQ
Research
hum0111
Date published
2021-03-08
Date modified
2021-03-08
DDBJ Search
JGAD000342 (opens in a new tab)
JGA Study
JGAS000242 (opens in a new tab)

Analysis method

RNA Amplicon-seq

Materials and participants
gastric carcinoma (ICD10: C16): 102 cases
(matched tumor and normal tissues)
(including 87 same cases in JGAD000104 and JGAD000210)
  • Health status
    Affected
  • Subject count
    102 (Individual)
Disease
  • gastric carcinoma
Sample description
RNAs extracted from cancer and normal tissues from gastric carcinoma patients
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
Amplicon-seq
Target
V region to C region of IgHV, IgKV and IgLV gene
Fragmentation
N/A
Platform
Illumina MiSeq
Read type
Paired-end
Read length
300 bp
Data use policy
NBDC data sharing policy (JGAP000001)