Dataset ID
JGAD000320
- Type of data
- NGS (Exome, RNA-seq)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 3.5 TB
- File formats
- FASTQ
- Research
- hum0227
- Date published
- 2021-12-02
- Date modified
- 2021-12-02
- DDBJ Search
- JGAD000320 (opens in a new tab)
- JGA Study
- JGAS000228 (opens in a new tab)
Analysis method
WES
- Materials and participants
- Stomach adenocarcinoma (ICD10: C16): 102 cases
tumor tissues: 102 samples
non-tumor tissues: 102 samples - Health statusAffected
- Subject count204 (Sample)
- Disease
- Stomach adenocarcinoma (C16)
- Sample description
- DNAs extracted from clinical specimens (tumor tissues and matched non-tumor tissues) of stomach adenocarcinoma
- TissueStomach
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Human All Exon V4
SureSelect Human All Exon V5 + lincRNA - Fragmentation
- Ultrasonic fragmentation (Covaris SS)
- Platform
- Illumina HiSeq 2500
- Read type
- Paired-end
- Read length
- 100 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)