Dataset ID
JGAD000319
- Type of data
- NGS (Exome)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 1.4 TB
- File formats
- FASTQ
- Research
- hum0156
- Date published
- 2021-12-22
- Date modified
- 2021-12-22
- DDBJ Search
- JGAD000319 (opens in a new tab)
- JGA Study
- JGAS000227 (opens in a new tab)
Analysis method
WES
- Materials and participants
- Esophageal cancer: 33 cases
tumor tissues: 52 samples
peripheral blood: 33 samples - Health statusAffected
- Subject count85 (Sample)
- Disease
- Esophageal cancer (C159)
- Sample description
- DNAs extracted from tumor tissues or peripheral blood from esophageal cancer patients
- TissueEsophagus, Peripheral blood
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Human All Exon V5
- Fragmentation
- Ultrasonic fragmentation (Covaris)
- Platform
- Illumina HiSeq 2500
- Read type
- Paired-end
- Read length
- 100 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)