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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000304

Type of data
NGS (RNA-seq)
Access criteria
Controlled-access (Type I)
Total data volume
14.2 GB
File formats
  • FASTQ
  • BAM
Research
hum0107
Date published
2020-09-28
Date modified
2021-04-20
DDBJ Search
JGAD000304 (opens in a new tab)
JGA Study
JGAS000218 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
Gorlin syndrome (ICD10: Q859) : 1 case
osteoblast differentiated from iPS cells established from oral mucosa fibroblast : 3 samples
osteoblast differentiated from iPS cells established from oral fibroblast cell line : 3 samples
  • Health status
    Affected
  • Subject count
    6 (Sample)
Disease
Gorlin syndrome (Q859)
Sample description
RNAs extracted from osteoblast differentiated from iPS cells established from oral mucosa fibroblast or fibroblast cell line
  • Tissue
    Oral mucosa, Osteoblast
  • Tumor / normal
    Normal
Cell line
iPSC
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
HiSeq SBS Kit v4
Fragmentation
N/A
Platform
Illumina HiSeq 2500
Read type
Paired-end
Read length
125 bp
Reference genome
GRCh38
Data use policy
NBDC data sharing policy (JGAP000001)