Dataset ID
JGAD000301
- Type of data
- NGS (Exome, RNA-seq)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 5.9 TB
- File formats
- FASTQ
- BAM
- Research
- hum0094
- Date published
- 2020-10-27
- Date modified
- 2026-09-26
- DDBJ Search
- JGAD000301 (opens in a new tab)
- JGA Study
- JGAS000215 (opens in a new tab)
Analysis method
WES
- Materials and participants
- Lung adenocarcinoma (ICD10: C34): 126 cases
- Health statusAffected
- Subject count126 (Individual)
- Disease
- Lung adenocarcinoma (C34)
- Sample description
- DNAs extracted from tumor tissues and paired non-tumor tissues or peripheral blood cells as non-tumor tissues
- TissuePeripheral blood
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- NEBNext Ultra DNA Library Prep Kit for Illumina
SureSelect Human All Exon V5
SureSelect Human All Exon V6 - Fragmentation
- Ultrasonic fragmentation (Covaris)
- Platform
- Illumina HiSeq 2000
Illumina HiSeq 2500
Illumina NovaSeq 6000 - Read type
- Paired-end
- Read length
- Lung adenocarcinoma: 134 bp
137 bp - Reference genome
- GRCh37
GRCh38
RNA-seq
- Materials and participants
- Lung adenocarcinoma (ICD10: C34): 126 cases
- Health statusAffected
- Subject count126 (Individual)
- Disease
- Lung adenocarcinoma (C34)
- Sample description
- RNAs extracted from tumor tissues
- Tumor / normalTumor
- Sample provider
- N/A
- Experimental method
- RNA-seq
- Target
- N/A
- Reagent kit
- NEBNext Ultra Directional RNA Library Prep Kit for Illumina
TruSeq RNA Exome - Fragmentation
- Heat treatment
- Platform
- Illumina HiSeq 2000
Illumina HiSeq 2500 - Read type
- Paired-end
- Read length
- Lung adenocarcinoma: 134 bp
137 bp