Dataset ID
JGAD000291
- Type of data
- NGS (Target Capture)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 274 GB
- File formats
- FASTQ
- VCF
- Research
- hum0203
- Date published
- 2020-09-28
- Date modified
- 2025-10-27
- DDBJ Search
- JGAD000291 (opens in a new tab)
- JGA Study
- JGAS000206 (opens in a new tab)
Unrestricted-access files linked to this dataset
| File | Label | Size | Copy URL |
|---|---|---|---|
| hum0203-GeneList.xlsx | 340 genes + immunoglobulin variable regions (IGH, IGK, IGL) | 14.4 KB |
Analysis method
Targeted DNA sequencing
- Materials and participants
- MM (ICD10: C900): 154 cases
primary tumor tissues: 154 samples
recurrent tumor tissues: 6 samples
peripheral blood mononuclear cells as a normal sample: 23 samples - Health statusAffected
- Subject count183 (Sample)
- Disease
- MM (C900)
- Sample description
- DNAs extracted from frozen bone marrow CD138 positive cells isolated from bone marrow aspirates and peripheral blood mononuclear cells
- TissueBone marrow, PBMC, Peripheral blood
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- Targeted DNA sequencing
- Reagent kit
- SureSelect Custom
- Fragmentation
- Ultrasonic fragmentation (Covaris ME220)
- Platform
- Illumina HiSeq 2500
- Read type
- Paired-end
- Read length
- 100–200 bp
- Reference genome
- GRCh37
- Processed data type
- Variant calls
- Data use policy
- NBDC data sharing policy (JGAP000001)