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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000272

Type of data
NGS (Target Capture)
Access criteria
Controlled-access (Type I)
Total data volume
252 MB
File formats
  • BAM
  • VCF
Research
hum0194
Date published
2020-09-28
Date modified
2025-10-27
DDBJ Search
JGAD000272 (opens in a new tab)
JGA Study
JGAS000189 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants
Lung adenocarcinoma (ICD10: C34): 2 cases
  • Health status
    Affected
  • Subject count
    2 (Individual)
Disease
Lung adenocarcinoma (C34)
Sample description
DNAs extracted from tumor tissues
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
Targeted DNA sequencing
Target
ABL1, AKT1, AKT3, ALK, APC, ATM, AXL, BCL2L11,
BRAF, BRCA1, BRCA2, CCND1, CDH1, CD274, CDKN2A,
CFTR, CREBBP, CSF1R, CTNNA3, CTNNB1, CUL3, DCC,
EGFR, EPHA2, EPHA7, ERBB2, ERBB3, ERBB4, FBXW7,
FGFR1, FGFR2, FGFR3, FGFR4, FLT3, FOXA1, FOXP1,
GNA11, GNAQ, GNAS, GRM3, HGF, HNF1A, HRAS,
IDH1, IDH2, IGF1R, JAK2, JAK3, KDR, KEAP1, KIT,
KLF4, KRAS, MAP2K1, MAP2K2, MC1R, MCL1, MED12,
MERTK, MET, MITF, MLH1, MLL2, MLL3, MPL, MSH2,
MSH6, MTOR, MYC, MYCN, NF1, NF2, NFE2L2, NOTCH1,
NOTCH2, NPM1, NRAS, NTRK1, NTRK2, NTRK3, PDGFRA,
PIK3C2B, PIK3CA, PIK3CG, PMS2, PTCH1, PTEN, PTPN11,
RAC1, RAC2, RB1, RET, ROCK2, ROS1, SH2B3, SLIT2,
SMAD4, SMARCA4, SMARCB1, SMO, SOX2, SPOP,
SRC, STK11, TP53, TRAF7, TSC1, TSC2, VHL
Reagent kit
HaloPlex HS Custom Kit
Fragmentation
Enzymatic fragmentation (included in the above library construction kit)
Platform
Illumina MiSeq
Read type
Paired-end
Read length
150 bp
Reference genome
GRCh38
Data use policy
NBDC data sharing policy (JGAP000001)