Dataset ID
JGAD000264
- Type of data
- NGS (Exome, RNA-seq)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 946 GB
- File formats
- FASTQ
- Research
- hum0152
- Date published
- 2020-09-28
- Date modified
- 2020-11-18
- DDBJ Search
- JGAD000264 (opens in a new tab)
- JGA Study
- JGAS000182 (opens in a new tab)
Analysis method
WES
- Materials and participants
- Dedifferentiated liposarcoma (ICD10: C480, C490, C492, C493): 37 cases
- Health statusAffected
- Subject count37 (Individual)
- Disease
- Dedifferentiated liposarcoma (C480, C490, C492, C493)
- Sample description
- DNAs extracted from tumor and non-tumor tissues
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Human All Exon V5
- Fragmentation
- Ultrasonic fragmentation (Covaris)
- Platform
- Illumina HiSeq 2500
- Read type
- Paired-end
- Read length
- 75 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)
RNA-seq
- Materials and participants
- Dedifferentiated liposarcoma (ICD10: C480, C490, C492, C493): 37 cases
- Health statusAffected
- Subject count37 (Individual)
- Disease
- Dedifferentiated liposarcoma (C480, C490, C492, C493)
- Sample description
- RNAs extracted from tumor tissues
- Tumor / normalTumor
- Sample provider
- N/A
- Experimental method
- RNA-seq
- Target
- N/A
- Reagent kit
- Ribo-Zero Gold Kit
- Fragmentation
- Heat treatment
- Platform
- Illumina HiSeq 2500
- Read type
- Paired-end
- Read length
- 75 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)