Skip to content
NBDC Human Database

No datasets in the cart.

Go to the cart

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000250

Type of data
NGS (Exome, Target Capture)
Access criteria
Controlled-access (Type I)
Total data volume
694 GB
File formats
  • FASTQ
Research
hum0176
Date published
2020-09-28
Date modified
2020-09-28
DDBJ Search
JGAD000250 (opens in a new tab)
JGA Study
JGAS000172 (opens in a new tab)

Analysis method

WES

Materials and participants
Uterine carcinosarcoma (ICD10: C549): 1 case (2 samples)
Ovarian carcinosarcoma (ICD10: C56): 3 case (6 samples)
  • Health status
    Affected
  • Subject count
    4 (Individual)
Disease
  • Uterine carcinosarcoma
  • Ovarian carcinosarcoma
Sample description
DNAs extracted from tumor and paired non-tumor tissues
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
SureSelect Human All Exon V5
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2000
Read type
Paired-end
Read length
101 bp
Data use policy
NBDC data sharing policy (JGAP000001)

Targeted DNA sequencing (CS-A/CS-B panels)

Materials and participants
Uterine carcinosarcoma (ICD10: C549): 91 case (182 samples)
Ovarian carcinosarcoma (ICD10: C56): 14 case (28 samples)
  • Health status
    Affected
  • Subject count
    105 (Individual)
Disease
  • Uterine carcinosarcoma
  • Ovarian carcinosarcoma
Sample description
DNAs extracted from tumor and paired non-tumor tissues
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
Targeted DNA sequencing
Target
CS-A: 491 genes, 2.605 Mbps
CS-B: 114 genes, 422.9 kbps
Reagent kit
SureSelect Custom
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2000
Read type
Paired-end
Read length
101 bp
Data use policy
NBDC data sharing policy (JGAP000001)