Dataset ID
JGAD000236
- Type of data
- NGS (Exome)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 3.1 TB
- File formats
- FASTQ
- Research
- hum0140
- Date published
- 2020-09-28
- Date modified
- 2020-11-18
- DDBJ Search
- JGAD000236 (opens in a new tab)
- JGA Study
- JGAS000158 (opens in a new tab)
Analysis method
WES
- Materials and participants
- 74 rectal cancer (ICD10: C20 [NG80]) treated with preoperative chemoraidotherapy
- Health statusAffected
- Subject count74 (Individual)
- Disease
- rectal cancer (C20)
- Sample description
- DNAs extracted from non-tumor tissues (or peripheral blood cells as normal tissues) and the primary tumor tissues
- TissuePeripheral blood
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Custom V5
- Fragmentation
- Ultrasonic fragmentation
- Platform
- Illumina HiSeq 2000
- Read type
- Paired-end
- Read length
- 200 bp
- Data use policy
- NBDC data sharing policy (JGAP000001)