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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000212

Type of data
NGS (WGS)
Access criteria
Controlled-access (Type I)
Total data volume
441 GB
File formats
  • FASTQ
Research
hum0143
Date published
2025-05-13
Date modified
2025-05-13
DDBJ Search
JGAD000212 (opens in a new tab)
JGA Study
JGAS000143 (opens in a new tab)

Analysis method

WGS

Materials and participants
HPDE cells
(P)RR-expressing (persistent) HPDE-1/E6E7 cells: 1 sample
(P)RR-expressing (transient) HPDE-1/E6E7 cells: 1 sample
Mock-expressing (persistent) HPDE-1/E6E7 cells: 1 sample
Mock-expressing (transient) HPDE-1/E6E7 cells: 1 sample
HPDE-1/E6E7 cells: 1 sample
HPDE-6/E6E7 cells: 1 sample
  • Subject count
    6 (Sample)
Sample description
DNA extracted from cell lines
  • Tissue
    Pancreatic ductal epithelial cell
  • Tumor / normal
    Normal
Cell line
HPDE-1/E6E7
HPDE-6/E6E7
Sample provider
HPDE-1/E6E7, HPDE-6/E6E7
Experimental method
WGS
Target
N/A
Reagent kit
TruSeq DNA PCR-Free Library Prep Kit
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2500
Illumina NovaSeq 6000
Read type
Paired-end
Read length
125 bp
Data use policy
NBDC data sharing policy (JGAP000001)