Dataset ID
JGAD000205
- Type of data
- NGS (Exome)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 34.9 GB
- File formats
- FASTQ
- BAM
- Research
- hum0139
- Date published
- 2020-09-28
- Date modified
- 2020-11-18
- DDBJ Search
- JGAD000205 (opens in a new tab)
- JGA Study
- JGAS000136 (opens in a new tab)
Analysis method
WES
- Materials and participants
- iPSCs from 1 RALD patient (ICD10: D763)
KRAS mutant (G13C/WT) iPSCs: 1 sample
wild-type isogenic (WT/WT) iPSCs: 1 sample - Health statusAffected
- Subject count2 (Sample)
- Disease
- RALD patient (D763)
- Sample description
- DNAs extracted from each iPSC
- TissueBone marrow
- Tumor / normalNormal
- Cell line
- iPSC
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Human All Exon V5
- Fragmentation
- SureSelect QXT Human All Exon V5: Enzymatic fragmentation (transposase-based library prep)
- Platform
- Illumina HiSeq 1500
- Read type
- Paired-end
- Read length
- 100 bp
- Reference genome
- GRCh37
- Data use policy
- NBDC data sharing policy (JGAP000001)