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Dataset ID

JGAD000125

Type of data: NGS (Exome)
Access criteria: Controlled-access (Type I)
Total data volume: 522 GB
File formats: BAM
Research: hum0070
Date published: 2020-09-28
Date modified: 2020-11-18
DDBJ Search: JGAD000125 (opens in a new tab)
JGA Study: JGAS000115 (opens in a new tab)

Analysis method

WES

Materials and participants: Birt-Hogg-Dube (BHD) associated kidney cancer: 15 cases
29 kidney cancer samples and 15 normal kidney samples; Health status
Mixed
Subject count
44 (Sample)
Sample description: DNAs extracted from kidney cancer and matched normal kidney samples; Tissue
Kidney
Tumor / normal
Mixed
Sample provider: N/A
Experimental method: WES
Target: N/A
Reagent kit: SureSelect Human All Exon V5 + lincRNA
Fragmentation: Ultrasonic fragmentation (Covaris S1)
Platform: Illumina HiSeq 2000
Read type: Paired-end
Read length: 100 bp
Reference genome: GRCh37
Phenotype data: Included
Data use policy: NBDC data sharing policy (JGAP000001)