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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000092

Type of data: NGS (Exome)
Access criteria: Controlled-access (Type I)
Total data volume: 733 GB
File formats: FASTQ
Research: hum0095
Date published: 2020-09-28
Date modified: 2020-11-18
DDBJ Search: JGAD000092 (opens in a new tab)
JGA Study: JGAS000092 (opens in a new tab)

Analysis method

WES

Materials and participants: colorectal adenomas or PCRCs: 10 cases in total
(63 samples [tumor tissues: 53 samples, non-tumor tissues: 10 samples]); Health status
Mixed
Subject count
10 (Individual)
Sample description: DNAs extracted from tumor tissues or non-tumor tissues (normal colonic mucosa tissues) from colorectal adenomas or PCRCs; Tissue
Colon
Tumor / normal
Mixed
Sample provider: N/A
Experimental method: WES
Target: N/A
Reagent kit: SureSelect Human All Exon V5
Fragmentation: Ultrasonic fragmentation (Covaris)
Platform: Illumina HiSeq 2500
Read type: Paired-end
Read length: 100 bp
Data use policy: NBDC data sharing policy (JGAP000001)