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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000091

Type of data: NGS (Exome)
Access criteria: Controlled-access (Type I)
Total data volume: 7.6 TB
File formats: FASTQ
Research: hum0058
Date published: 2020-09-28
Date modified: 2020-11-18
DDBJ Search: JGAD000091 (opens in a new tab)
JGA Study: JGAS000091 (opens in a new tab)

Analysis method

WES

Materials and participants: colorectal cancer: 89 cases (Total: 297 samples)
non-tumor tissue: 89 samples
tumor tissue (metastasis/recurrence): 208 samples; Health status
Affected
Subject count
89 (Individual)
Sample description: DNAs extracted from tumor and non-tumor tissues from 89 colorectal cancer patients; Tumor / normal
Mixed
Sample provider: N/A
Experimental method: WES
Target: N/A
Reagent kit: SureSelect Human All Exon V4
SureSelect Human All Exon V5 + lincRNA
Fragmentation: Ultrasonic fragmentation (Covaris E220)
Platform: Illumina HiSeq 2000
Read type: Paired-end
Read length: 100 bp
Data use policy: NBDC data sharing policy (JGAP000001)