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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000015

Type of data
NGS (Target Capture)
Access criteria
Controlled-access (Type I)
Total data volume
3.1 GB
File formats
  • FASTA
  • SFF
Research
hum0011
Date published
2020-09-28
Date modified
2020-11-18
DDBJ Search
JGAD000015 (opens in a new tab)
JGA Study
JGAS000015 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants
1 PLC/PRF/5 cell
1 HepG22215 cell
8 HB-HCC primary tissues
  • Health status
    Affected
  • Subject count
    10 (Mixed)
Sample description
HB-HCC primary tissues
  • Tissue
    Liver
  • Tumor / normal
    Tumor
Cell line
HepG2
PLC/PRF/5
Sample provider
PLC/PRF/5 cell [hepatocellular carcinoma cell line (producing HBsAg)]
HepG22215 cell [hepatoblastoma cell line (contain an integrated copy of the HBV genome)]
Experimental method
Targeted DNA sequencing
Target
hepatitis B viral integrants with flanking human genomic sequences
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Roche GS FLX Titanium
Read length
321.1 bp
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)