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Dataset ID

E-GEAD-415

Type of data: NGS (Hi-C)
Access criteria: Unrestricted-access
Total data volume: 45.0 GB
File formats: HIC
TXT
Research: hum0257
Date published: 2021-12-27
Date modified: 2022-06-10
DDBJ Search: E-GEAD-415 (opens in a new tab)

Analysis method

Hi-C

Materials and participants: Pancreatic ductal adenocarcinoma (ICD10: C25.3): 2 cases
[JGAD000365] organoids derived from tumor tissues: 2 samples; Health status
Affected
Subject count
2 (Individual)
Disease: Pancreatic ductal adenocarcinoma (C253)
Sample description: Cross-linked DNAs extracted from organoids established from pancreatic tumors; Tissue
Organoid
Tumor / normal
Tumor
Sample provider: N/A
Experimental method: Hi-C
Target: N/A
Reagent kit: Arima Hi-C Kit
Fragmentation: Enzymatic fragmentation
Platform: Illumina NovaSeq 6000
Read type: Paired-end
Read length: 150 bp
Data use policy: NBDC data sharing policy (JGAP000001)