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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

DRA014819

Type of data
NGS (Target Capture)
Access criteria
Unrestricted-access
Total data volume
9.9 GB
File formats
  • FASTQ
Research
hum0335
Date published
2022-09-13
Date modified
2022-09-13
DDBJ Search
DRA014819 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants
Waldenström macroglobulinemia (ICD10: C880): 10 cases
5 bone marrow mononuclear cells
1 peripheral blood mononuclear cell
2 bone marrow formalin-fixed paraffin-embedded (FFPE) specimens
2 lymph node FFPE specimens
non IgM-type LPL (ICD10: C830): 10 cases
3 bone marrow mononuclear cells
3 peripheral blood mononuclear cells
4 bone marrow FFPE specimens
  • Health status
    Affected
  • Subject count
    20 (Individual)
Disease
Waldenström macroglobulinemia (C880)
non IgM-type LPL (C830)
Sample description
DNAs extracted from bone marrow mononuclear cells, peripheral blood mononuclear cells, bone marrow FFPE specimens or lymph node FFPE specimens
  • Tissue
    Bone marrow, Bone marrow mononuclear cell, Lymph node, PBMC, Peripheral blood
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
Targeted DNA sequencing
Target
ARID1A, NOTCH2, CXCR4, MYD88, PRDM1, CD274, PDCD1LG2, RAG2, KMT2D, MYBBP1A, TP53, CD79B
Reagent kit
AmpliSeq Custom Panel
Fragmentation
N/A
Platform
Illumina NextSeq 500
Read type
Single-end
Read length
151 bp
Reference genome
GRCh37
Data use policy
NBDC data sharing policy (JGAP000001)