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Dataset ID

DRA001273

Type of data: NGS (Target Capture: Nine genes)
Access criteria: Unrestricted-access
Total data volume: 828 MB
File formats: FASTQ
Research: hum0005
Date published: 2014-01-06
Date modified: 2014-05-13
DDBJ Search: DRA001273 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants: 17 usher syndrome patients; Health status
Affected
Subject count
17 (Individual)
Sample description: gDNA extracted from peripheral blood cells; Tissue
Peripheral blood
Tumor / normal
Normal
Sample provider: N/A
Experimental method: Targeted DNA sequencing
Target: Nine genes
(MYO7A, USH1C, CDH23, PCDH15, SANS[USH1G],
USH2A, GPR98[USH2C], DFNB31[USH2D], CLRN[USH3A])
Reagent kit: Ion AmpliSeq Custom Panel
Fragmentation: N/A
Platform: Thermo Fisher Scientific Ion PGM
Read type: Single-end
Read length: 200 bp
Data use policy: NBDC data sharing policy (JGAP000001)