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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Research ID

hum0290-v1Release info

This page is a past version (v1). The latest version is v2.
Latest version (v2)

Research title

Comprehensive analysis of interaction between human gene expression and environmental metagenomes.

Research overview

Aims
Through genome cohort studies targeting healthy volunteers who work or live in the Kashiwa-no-ha area, we aim to realize a safer and more comfortable living environment and build a foundation for drug discovery research and the development of personalized medicine.
Methods
WGS, 10x scRNA, 10x TCR, 10x BCR, CyTOF, scATAC-seq, Olink, and methylation array analyses were performed using blood samples collected from healthy volunteers aged 18 years or older who worked or lived in the Kashiwa-no-ha area.
Participants/materials
7 healthy volunteers aged 18 years or older who worked or lived in the Kashiwa-no-ha area
URL

Datasets

The list is the one this version published; each dataset's content is shown as it is now.

CartDataset IDType of dataAnalysis methodAccess criteriaDate published
JGAD000432NGS (WGS)
NGS (scRNA-seq)
NGS (TCR-seq)
NGS (BCR-seq)
CyTOF
  • WGS
  • scRNA-seq
  • TCR-seq
Controlled-access (Type I)2022-02-17

Data provider

Principal investigator
Yutaka Suzuki
Affiliation
Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo

Research projects

No research projects.

Grants

NameTitleProject number
JST Moonshot R&D - MILLENNIA Program
Understanding and Control of Virus-Human Interaction Networks
  • JPMJMS2025

Related publications

TitleDOIDataset ID
Intensive Single Cell Analysis Reveals Immune Cell Diversity among Healthy Individuals
https://doi.org/10.26508/lsa.202201398 (opens in a new tab)
Multimodal single-cell analyses of peripheral blood mononuclear cells of COVID-19 patients in Japan
https://doi.org/10.1038/s41598-023-28696-9 (opens in a new tab)

Controlled access users

No use of the controlled access data has been recorded.