NBDC Research ID: hum0436.v1
SUMMARY
Aims: To elucidate gene expression differences in the cerebellar tissues between patients with autism spectrum disorder (ASD) and control patients without ASD segmented by age.
Methods: RNA-seq analysis (the differences of mRNA expression level and mRNA isoform expression levels segmented by age)
Participants/Materials: 16 ASD patients and 17 control patients
| Dataset ID | Type of Data | Criteria | Release Date |
|---|---|---|---|
| JGAS000668 | NGS (RNA-seq) | Controlled-access (Type I) | 2024/02/06 |
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MOLECULAR DATA
| Participants/Materials |
Autistic disorder (ICD10: F84.0): 16 cases 17 control patients without ASD |
| Targets | RNA-seq |
| Target Loci for Capture Methods | - |
| Platform | Illumina [HiSeq 2000] |
| Library Source | RNAs extracted from cerebellar tissues |
| Cell Lines | NIH neurobiobank |
| Library Construction (kit name) | TruSeq Stranded mRNA Library Prep Kit |
| Fragmentation Methods | Ultrasonic fragmentation |
| Spot Type | Paired-end |
| Read Length (without Barcodes, Adaptors, Primers, and Linkers) | 100 bp |
| Japanese Genotype-phenotype Archive Dataset ID | JGAD000798 |
| Total Data Volume | 273.8 GB (fastq) |
| Comments (Policies) | NBDC policy |
DATA PROVIDER
Principal Investigator: Tetsuya Marui
Affiliation: Department of Medical Genome Science, Graduate School of Frontier Sciences, The University of Tokyo
Project / Group Name: -
Funds / Grants (Research Project Number):
| Name | Title | Project Number |
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PUBLICATIONS
| Title | DOI | Dataset ID | |
|---|---|---|---|
| 1 | |||
| 2 |
USRES (Controlled-access Data)
| Principal Investigator | Affiliation | Country/Region | Research Title | Data in Use (Dataset ID) | Period of Data Use |
|---|---|---|---|---|---|
