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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
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Dataset ID

NHA000069

Type of data
GWAS for 224 Childhood Idiopathic Nephrotic Syndrome patients and 419 healthy adult controls
Access criteria
Unrestricted-access
Total data volume
11.9 MB
File formats
  • XLSX
  • ZIP
Research
hum0126
Date published
2018-04-27
Date modified
2018-04-27
Secondary ID
hum0126.v1.gwas.v1

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0126.v1.gwas.v1.zip11.9 MB
hum0126.v1.gwas.v1_header.xlsxDictionary file11.7 KB

Analysis method

Genotyping by array

Materials and participants
224 Childhood Idiopathic Nephrotic Syndrome patients (ICD10: N049) and 419 healthy adult controls
  • Health status
    Mixed
  • Subject count
    643 (Individual)
  • Age group
    Child
Disease
Childhood Idiopathic Nephrotic Syndrome patients (N049)
Sample description
DNAs extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
Axiom 2.0 Reagent Kit
Platform
Affymetrix Japonica Array
Reference genome
GRCh37
QC and filtering
Sample Call rate < 0.97, SNP call rate < 0.97, HWE P < 0.0001, MAF < 0.05
Analysis method
Axiom Analysis suite 1.0.0.3
Variant count
495,887 SNPs
Data use policy
NBDC data sharing policy (JGAP000001)