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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
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Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

NHA000060

Type of data
GWAS for 125 patients with HLA-DQB1*06:02 negative essential hypersomnia and 562 HLA-DQB1*06:02 negative healthy controls
Access criteria
Unrestricted-access
Total data volume
31.6 MB
File formats
  • XLSX
  • ZIP
Research
hum0072
Date published
2017-12-26
Date modified
2017-12-26
Secondary ID
hum0072.v1.ehs.v1

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0072.v1.ehs.v1.zip31.6 MB
hum0072_GWAS_header.xlsxDictionary file11.3 KB

Analysis method

Genotyping by array

Materials and participants
125 patients with HLA-DQB106: 02 negative essential hypersomnia
562 HLA-DQB106: 02 negative healthy controls
  • Health status
    Mixed
  • Subject count
    687 (Individual)
Sample description
gDNA extracted from peripheral blood cells
  • Tissue
    Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
Genotyping by array
Target
N/A
Reagent kit
Genome-Wide Human SNP Array 6.0 Kit
Platform
Affymetrix Genome-Wide Human SNP Array 6.0
Reference genome
NCBI36
QC and filtering
Sample call rate < 0.95, SNP call rate < 0.99, HWE P < 0.001
Analysis method
Birdseed (version 1.5.5)
Variant count
508,309 SNPs
Data use policy
NBDC data sharing policy (JGAP000001)