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Dataset ID

JGAD000700

Type of data: Metagenome
Access criteria: Controlled-access (Type I)
Total data volume: 845 MB
File formats: FASTQ
Research: hum0371
Date published: 2022-12-21
Date modified: 2022-12-21
DDBJ Search: JGAD000700 (opens in a new tab)
JGA Study: JGAS000574 (opens in a new tab)

Analysis method

Metagenomics

Materials and participants: NASH (ICD10: K75.81): 20 cases
patients with diabetes who were also diagnosed NASH as Matteoni classification class 3 or 4; Health status
Affected
Subject count
20 (Individual)
Disease: NASH (K758)
Sample description: DNA extracted from stool samples; Tissue
Feces
Tumor / normal
Normal
Sample provider: N/A
Experimental method: Metagenomics
Target: 16S rDNA
Reagent kit: Nextera XT Index Kit v2
16S Metagenomic Sequencing Library Prep
Fragmentation: N/A
Platform: Illumina MiSeq
Read type: Paired-end
Read length: 301 bp
Data use policy: NBDC data sharing policy (JGAP000001)