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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000662

Type of data
Raw sequencing data of single-cell RNA-seq
Access criteria
Controlled-access (Type I)
Total data volume
1.3 TB
File formats
  • FASTQ
Research
hum0197
Date published
2022-07-19
Date modified
2023-02-14
DDBJ Search
JGAD000662 (opens in a new tab)
JGA Study
JGAS000543 (opens in a new tab)

Unrestricted-access files linked to this dataset

Download the URL list
FileLabelSizeCopy URL
hum0197_v13_Phenotype_README.xlsx10.2 KB

Analysis method

scRNA-seq

Materials and participants
COVID-19 (ICD10: U071) : 30 + 43 + 15 cases
Healthy controls : 31 + 44 + 27 individuals
  • Health status
    Mixed
  • Subject count
    190 (Individual)
Disease
COVID-19 (U071)
Sample description
RNAs extracted from PBMC
  • Tissue
    PBMC, Peripheral blood
  • Tumor / normal
    Normal
Sample provider
N/A
Experimental method
scRNA-seq
Target
N/A
Reagent kit
Chromium Next GEM Chip G Single Cell Kit
Chromium Next GEM Single Cell 5' v1.1
Single Index Kit T Set A
Fragmentation
Enzymatic fragmentation
Platform
Illumina NovaSeq 6000
Read type
Paired-end
Read length
91 bp
Phenotype data
Included
Data use policy
NBDC data sharing policy (JGAP000001)