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Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
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We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000361

Type of data: NGS (Target Capture)
Access criteria: Controlled-access (Type I)
Total data volume: 27.1 GB
File formats: FASTQ
Research: hum0240
Date published: 2020-10-27
Date modified: 2020-11-18
DDBJ Search: JGAD000361 (opens in a new tab)
JGA Study: JGAS000258 (opens in a new tab)

Analysis method

Targeted DNA sequencing

Materials and participants: PCNSL (ICD10: C859): 28 cases; Health status
Affected
Subject count
28 (Individual)
Disease: PCNSL (C859)
Sample description: DNAs extracted from primary tumor tissues and peripheral blood cells; Tissue
Peripheral blood
Tumor / normal
Mixed
Sample provider: N/A
Experimental method: Targeted DNA sequencing
Target: 409 genes (Ion Ampliseq Comprehensive Cancer Panel)
Reagent kit: Ion AmpliSeq Library Kit 2.0
Fragmentation: FuPa Reagent (Thermo Fisher Scientific)
Platform: Thermo Fisher Scientific Ion Torrent
Read type: Paired-end
Read length: 100 bp
Data use policy: NBDC data sharing policy (JGAP000001)