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Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000118

Type of data
NGS (WGS)
NGS (Exome)
Access criteria
Controlled-access (Type I)
Total data volume
1.9 TB
File formats
  • FASTQ
Research
hum0103
Date published
2020-09-28
Date modified
2021-11-26
DDBJ Search
JGAD000118 (opens in a new tab)
JGA Study
JGAS000109 (opens in a new tab)

Analysis method

WES

Materials and participants
biliary tract cancer (ICD10: C22, 23, 24): 81 cases
cancer tissues: 138 samples
paired non-cancer 128 samples
biliary tract cancer (ICD10: C221, C240, C248, C23): 29 cases (including 3 cases used for WGS)
cancer tissues: 29 samples
paired non-cancer tissues: 29 samples
  • Health status
    Mixed
  • Subject count
    110 (Individual)
Disease
biliary tract cancer (C22, C23, C24)
biliary tract cancer (C221, C240, C248, C23)
Sample description
DNAs extracted from cancer and paired non-cancer (normal) tissues from biliary tract cancer patients
  • Tumor / normal
    Mixed
Sample provider
N/A
Experimental method
WES
Target
N/A
Reagent kit
Nextera Rapid Capture Kit
SureSelect Human All Exon V5
Fragmentation
Ultrasonic fragmentation (Covaris)
Platform
Illumina HiSeq 2000
Illumina HiSeq 2500
Read type
Paired-end
Read length
93 bp
126 bp
Data use policy
NBDC data sharing policy (JGAP000001)