Skip to content
NBDC Human Database

No datasets in the cart.

Go to the cart

Due to system maintenance, the application system, application review by the Data Access Committee will be unavailable during the following period.
Schedule: October 5th (Mon), 2026, 9:00 - October 7th (Wed), 2026, 15:00 (JST)
We apologize for any inconvenience this may cause and appreciate your understanding.

We are currently receiving a large number of applications for data submission, and the review process is taking longer than usual.We sincerely apologize for the delay and kindly ask for your understanding. When submitting an application, we would greatly appreciate it if you could allow sufficient time for the processing.

Following a change to our organizational structure effective April 1, 2026, this division has been renamed from the "Database Center for Life Science, Joint Support-Center for Data Science Research" to the "Database Division for Life Science (DBCLS), BioData Science Initiative (BSI), National Institute of Genetics (NIG)". Where the former name still appears in the guidelines, please read it as the new name.

Dataset ID

JGAD000113

Type of data
gliomas (diffuse cerebellar glioma, cerebral glioblastoma, thalamic glioma)
NGS (Exome, RNA-seq), Methylation array
Access criteria
Controlled-access (Type I)
Total data volume
390 GB
File formats
  • FASTQ
  • BAM
Research
hum0006
Date published
2020-09-28
Date modified
2025-10-27
DDBJ Search
JGAD000113 (opens in a new tab)
JGA Study
JGAS000106 (opens in a new tab)

Analysis method

RNA-seq

Materials and participants
oligodendroglioma (ICD10: C71): 16 cases (27 samples)
diffuse cerebellar glioma (ICD10: C71): 14 cases (14 samples)
cerebral glioblastoma (ICD10: C71): 8 cases (8 samples)
glioma (ICD10: C71): 24 cases (31 samples)
8 pairs of primary-recurrent gliomas, 8 primary gliomas, and 7 recurrent gliomas
  • Health status
    Affected
Disease
oligodendroglioma (C71)
diffuse cerebellar glioma (C71)
cerebral glioblastoma (C71)
glioma (C71)
Sample description
RNAs extracted from surgical specimen of brain tumors (primary and matched recurrent samples) and paired normal peripheral blood cells.
  • Tissue
    Brain, Peripheral blood
  • Tumor / normal
    Tumor
Sample provider
N/A
Experimental method
RNA-seq
Target
N/A
Reagent kit
TruSeq Stranded Total RNA Library Prep Kit
Fragmentation
Alkalization
Platform
Illumina HiSeq 2000
Read type
Paired-end
Read length
100 bp
Data use policy
NBDC data sharing policy (JGAP000001)