Dataset ID
JGAD000087
- Type of data
- NGS (Exome)
- Access criteria
- Controlled-access (Type I)
- Total data volume
- 1.9 TB
- File formats
- FASTQ
- Research
- hum0134
- Date published
- 2020-09-28
- Date modified
- 2020-11-18
- DDBJ Search
- JGAD000087 (opens in a new tab)
- JGA Study
- JGAS000087 (opens in a new tab)
Analysis method
WES
- Materials and participants
- B cell lymphoma: 60 cases (Total: 147 samples)
non-tumor tissue: 60 samples
tumor tissue (metastasis/recurrence): 87 samples - Health statusMixed
- Subject count60 (Individual)
- Sample description
- DNAs extracted from tumor and non-tumor tissues from 60 B cell lymphoma patients
- Tumor / normalMixed
- Sample provider
- N/A
- Experimental method
- WES
- Target
- N/A
- Reagent kit
- SureSelect Human All Exon V4
SureSelect Human All Exon V5 + lincRNA - Fragmentation
- Ultrasonic fragmentation (Covaris E220)
- Platform
- Illumina HiSeq 2000
- Read type
- Paired-end
- Read length
- 100 bp
- Phenotype data
- Included
- Data use policy
- NBDC data sharing policy (JGAP000001)