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Dataset ID

JGAD000076

Type of data: NGS (Exome)
Access criteria: Controlled-access (Type I)
Total data volume: 2.5 TB
File formats: FASTQ
Research: hum0067
Date published: 2020-09-28
Date modified: 2020-11-18
DDBJ Search: JGAD000076 (opens in a new tab)
JGA Study: JGAS000076 (opens in a new tab)

Analysis method

WES

Materials and participants: ovarian clear cell carcinoma: 55 cases
(tumor: 55 samples and non-tumor: 55 samples); Health status
Affected
Subject count
55 (Individual)
Sample description: DNAs extracted from tumor and non-tumor tissues; Tissue
Peripheral blood, Stromal cell
Tumor / normal
Mixed
Sample provider: N/A
Experimental method: WES
Target: N/A
Reagent kit: SureSelect Human All Exon V5 + lincRNA
Fragmentation: Ultrasonic fragmentation
Platform: Illumina HiSeq 2000
Read type: Paired-end
Read length: 100 bp
Data use policy: NBDC data sharing policy (JGAP000001)