NBDC Research ID: hum0308.v1
SUMMARY
Aims: Evaluate the site differentiation of scalp and facial skin of sebum RNA
Methods: AmpliSeq Transcriptome analysis was performed to analyze human mRNA expressions in sebum RNA
Participants/Materials: ten females (facial sebum 10 samples and scalp sebum 10 samples)
| Dataset ID | Type of Data | Criteria | Release Date |
|---|---|---|---|
| JGAS000417 | NGS (RNA-seq) | Controlled-access (Type I) | 2022/03/11 |
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MOLECULAR DATA
| Participants/Materials |
10 healthy females facial sebum 10 samples and scalp sebum 10 samples |
| Targets | RNA-seq |
| Target Loci for Capture Methods | - |
| Platform | Thermo Fisher Scientific [Ion S5] |
| Library Source | RNAs extracted from sebum |
| Cell Lines | - |
| Library Construction (kit name) | Ion AmpliSeq Transcriptome Human Gene Expression Kit |
| Fragmentation Methods | - |
| Spot Type | Single-end |
| Read Length (without Barcodes, Adaptors, Primers, and Linkers) | 110 bp |
| Japanese Genotype-phenotype Archive Dataset ID | JGAD000534 |
| Total Data Volume | 73.1 GB (bam) |
| Comments (Policies) | NBDC policy |
DATA PROVIDER
Principal Investigator: Takayoshi Inoue
Affiliation: Biological Science Laboratories, Kao Corporation
Project / Group Name: Sebum RNA project
Funds / Grants (Research Project Number):
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| Name | Title | Project Number |
|---|---|---|
| - | - | - |
PUBLICATIONS
| Title | DOI | Dataset ID | |
|---|---|---|---|
| 1 | Non-invasive human skin transcriptome analysis using mRNA in skin surface lipids | doi: 10.1038/s42003-022-03154-w | JGAD000534 |
| 2 |
USRES (Controlled-access Data)
| Principal Investigator | Affiliation | Country/Region | Research Title | Data in Use (Dataset ID) | Period of Data Use |
|---|---|---|---|---|---|
| Michiaki Hamada | Faculty of Science and Engineering, Waseda University | Japan | Construction of RNA-targeted Drug Discovery Database | JGAD000534 | 2022/12/26-2025/03/31 |