hum0056 Release Note

Research IDRelease DateType of Data
hum0056.v1 2018/03/30 NGS (WGS, WGBS, RNA-seq)

 

hum0056.v1

This article provides following analisys results about gDNAs and RNA extracted from high quality purified monocytes, CD4+ T cells, and neutrophil from 197 participants

(1) Allele Frequencies from WGS

Multiplex sequence was performed with Illumina [HiSeq 2500/HiSeq X] (162 bp or 150 bp, Paired-end) after library preparation by using of TruSeq DNA PCR-Free HT Sample Prep Kit. Allele counts of SNPs more than 1 are provided (txt file).

 

(2) Methylation Rate at each CpG site from WGBS

Multiplex sequence was performed with Illumina [HiSeq 2500] (125 bp, Paired-end) after library preparation by TruSeq DNA Methylation Kit. Methylation Rates at each CpG site are provided (txt file).

 

(3) Average of FPKM value from RNA-seq

Multiplex sequence was performed with Illumina [HiSeq 2500] (125 bp, Single-end) after library preparation by TruSeq RNA Library Preparation Kit v2. Averages of FPKM values for each gene are provided (txt file).

 

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