hum0056 Release Note
Research ID | Release Date | Type of Data |
---|---|---|
hum0056.v1 | 2018/03/30 | NGS (WGS, WGBS, RNA-seq) |
hum0056.v1
This article provides following analisys results about gDNAs and RNA extracted from high quality purified monocytes, CD4+ T cells, and neutrophil from 197 participants
(1) Allele Frequencies from WGS
Multiplex sequence was performed with Illumina [HiSeq 2500/HiSeq X] (162 bp or 150 bp, Paired-end) after library preparation by using of TruSeq DNA PCR-Free HT Sample Prep Kit. Allele counts of SNPs more than 1 are provided (txt file).
(2) Methylation Rate at each CpG site from WGBS
Multiplex sequence was performed with Illumina [HiSeq 2500] (125 bp, Paired-end) after library preparation by TruSeq DNA Methylation Kit. Methylation Rates at each CpG site are provided (txt file).
(3) Average of FPKM value from RNA-seq
Multiplex sequence was performed with Illumina [HiSeq 2500] (125 bp, Single-end) after library preparation by TruSeq RNA Library Preparation Kit v2. Averages of FPKM values for each gene are provided (txt file).
Note: