NBDC Research ID: hum0023.v1
SUMMARY
Aims: Identify susceptible genes in hypertension
Methods: Whole Exome sequencing by using of Illumina HiSeq 2000
Participants/Materials: Patients with severe hypertension
Dataset ID | Type of Data | Criteria | Release Date |
---|---|---|---|
JGAS000016 | NGS (Exome) | Controlled-access (Type I) | 2015/01/28 |
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MOLECULAR DATA
Participants/Materials | Thirty patients with severe hypertension. |
Targets | Exome |
Target Loci for Capture Methods | - |
Platform | Illumina [HiSeq 2000] |
Library Source | gDNA extracted from peripheral blood cells |
Cell Lines | - |
Library Construction (kit name) |
SureSelect Human All Exon 50 Mb Kit (Agilent) |
Fragmentation Methods | Covaris (S220) |
Spot Type | Paired-end |
Read Length (without Barcodes, Adaptors, Primers, and Linkers) | 100 bp |
Japanese Genotype-phenotype Archive Dataset ID | JGAD000016 |
Total Data Volume | 405 GB (634 files) |
Comments (Policies) |
This study was supported by “Genome Science”. “Genome Science” is a part of the “Support Programs for Three Fields in Life Sciences (cancer, genome and brain sciences)” established by the Ministry of Education, Culture, Sports, Science and Technology (MEXT) under the Grant-in-Aid for Scientific Research on Innovative Areas.
DATA PROVIDER
Principal Investigator: Tetsurou Miki
Affiliation: Department of Geriatric Medicine and Neurology, Ehime University, Graduate School of Medicine
Project / Group Name: Millennium Genome Project
Funds / Grants (Research Project Number):
Name | Title | Project Number |
---|---|---|
KAKENHI Grant-in-Aid for Scientific Research (B) |
Identification of genetic predisposition to non-communicable diseases by a large-scale longitudinal genetic epidemiological study. |
21390099 |
PUBLICATIONS
Title | DOI | Dataset ID | |
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1 | |||
2 |
USERS (Controlled-access Data)
Principal Investigator | Affiliation | Country/Region | Research Title | Data in Use (Dataset ID) | Period of Data Use |
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