NBDC Research ID: hum0022.v1



Aims: To clarify the molecular mechanism underlying malignant transformation of Donor-cell derived leukemia (DCL).

Methods: Whole Exome Sequencing was performed by using of Illumina HiSeq 2000.

Participants/Materials: One DCL patient and one donor


Dataset IDType of DataCriteriaRelease Date
JGAS000017 NGS (Exome) Controlled-access (Type I) 2015/02/02

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Participants/Materials One DCL patient (cells were obtained at the points of initial acute myeloid leukemia, remission stage, relapsed stage, and DCL at late stage). One donor (normal peripheral blood)
Targets Exome
Target Loci for Capture Methods


Platform Illumina [HiSeq 2000]
Library Source Genomic DNAs were extracted from leukemic cells from bone marrow aspirate or peripheral blood.
Cell Lines -
Library Construction (kit name) SureSelect Kit (Agilent)
Fragmentation Methods Ultrasonic fragmentation (Covaris S220)
Spot Type Paired-end
Read Length (without Barcodes, Adaptors, Primers, and Linkers) 100 bp
Japanese Genotype-phenotype Archive Dataset ID JGAD000017
Total Data Volume 500 GB (bam [ref: GRCh37])
Comments (Policies)

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Principal Investigator: Hitoshi Kiyoi

Affiliation: Department of Hematology and Oncology, Nagoya University Graduate School of Medicine

Project / Group Name: Project for Development of Innovative Research on Cancer Therapeutics , Team for Strategic Therapy Design

Funds / Grants (Research Project Number):

NameTitleProject Number

Project for Development of Innovative Research on Cancer Therapeutics (P-DIRECT)

Therapy 1 : Establishment of the strategic therapy design based on the development of molecular-targeted drugs

Therapy 1 - ① : Establishment of the optimal remedy based on the leukemia genome study



TitleDOIDataset ID
1 Leukemic evolution of donor-derived cells harboring IDH2 and DNMT3A mutations after allogeneic stem cell transplantation doi:10.1038/leu.2013.278 JGAD000017


USERS (Controlled-access Data)

Principal InvestigatorAffiliationCountry/RegionResearch TitleData in Use (Dataset ID)Period of Data Use
Seishi Ogawa Kyoto University JGAD000017 2015/12/22-2016/03/31