{"id":"hum0287","version":3,"url":"https://humandbs.dbcls.jp/research/hum0287/v3","datePublished":"2024-05-01","versions":[{"version":1,"datePublished":"2021-11-02"},{"version":2,"datePublished":"2023-03-29"},{"version":3,"datePublished":"2024-05-01"}],"title":{"ja":"ヒトiPS細胞株のゲノム配列比較","en":"Genome sequence comparison of human iPS cell lines"},"summary":{"aims":{"ja":"ヒトiPS細胞株のゲノム配列比較","en":"Genome sequence comparison of human iPS cell lines"},"methods":{"ja":"ヒトiPS細胞株からゲノムDNAを抽出し、全ゲノム配列解析を行った。","en":"Genomic DNA was extracted from human iPS cell lines and whole genome sequence analysis was performed."},"targets":{"ja":"ヒトiPS細胞株5＋1＋1株","en":"Human iPS cell lines"},"url":{"ja":null,"en":null}},"listingSummary":{"methods":{"ja":"配列決定","en":"Sequencing"},"targets":{"ja":"ヒトiPS細胞株：5＋1＋1株\n（細胞株）","en":"5 +1 +1 Human iPS cell lines\n(Cell-line)"},"typeOfData":{"ja":"NGS\n（WGS）","en":"NGS\n(WGS)"}},"releaseNote":{"ja":"ヒトiPS細胞株1株（AGVTノックイン株）から抽出したgDNAを用いたwhole genome sequence解析データをfastqファイルにて提供する。","en":"gDNA extracted from 1 human iPS cell line (AGVT cell line) was used for the whole genome sequence analysis. Fastq files are provided."},"dataProviders":[{"name":{"ja":"横林 しほり","en":"Shihori Yokobayashi"},"organization":{"name":{"ja":"京都大学 iPS細胞研究所 / 医学研究科 機能微細形態学","en":"Center for iPS Cell Research and Application, Department of Anatomy and Cell Biology, Graduate School of Medicine, Kyoto University"}}}],"researchProjects":[],"grants":[{"title":{"ja":"エピゲノムリプログラミング過程のゆらぎに関わるクロマチン高次動態の解明","en":"Chromatin dynamics linked to the epigenomic heterogeneity in human pluripotent stem cells"},"agency":{"ja":"科学研究費助成事業 新学術領域研究（研究領域提案型）","en":"KAKENHI Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)"},"grantIds":["20H05387"]},{"title":{"ja":"哺乳類始原生殖細胞におけるクロマチン高次構造と核内動態変化の分子的理解","en":"Chromatin dynamics during primordial germ cell development in mammals"},"agency":{"ja":"科学研究費助成事業 基盤研究（B）","en":"KAKENHI Grant-in-Aid for Scientific Research (B)"},"grantIds":["18H02613"]},{"title":{"ja":"試験管内再構成系に基づくヒト卵母細胞発生機構の解明とその応用","en":"Elucidation of the mechanism for human oocyte development based on its in vitro reconstitution"},"agency":{"ja":"科学研究費助成事業 特別推進研究","en":"KAKENHI Grant-in-Aid for Specially Promoted Research"},"grantIds":["22H04920"]}],"relatedPublications":[{"title":"Inherent genomic properties underlie the epigenomic heterogeneity of human induced pluripotent stem cells","doi":"https://doi.org/10.1016/j.celrep.2021.109909","datasets":["JGAD000421"]},{"title":"Induction of fetal meiotic oocytes from embryonic stem cells in cynomolgus monkeys","doi":"https://doi.org/10.15252/embj.2022112962","datasets":["JGAD000699"]}],"datasets":["JGAD000421","JGAD000699","JGAD000823"],"controlledAccessUsers":[]}