{"id":"NHA000011","research":"hum0014","url":"https://humandbs.dbcls.jp/dataset/NHA000011","datePublished":"2015-12-28","dateModified":"2015-12-28","values":[{"key":"access-criteria","label":{"ja":"アクセス制限","en":"Access criteria"},"type":"vocabulary","terms":[{"code":"unrestricted-access","label":{"ja":"非制限公開","en":"Unrestricted-access"}}]},{"key":"type-of-data","label":{"ja":"データの種類","en":"Type of data"},"type":"text","text":{"ja":"35疾患各約190症例における遺伝子型カウント情報\n（JSNPのデータ）","en":"Genotype frequencies in each disease\n(JSNP data)"}}],"experiments":[{"label":"Genotyping by array","values":[{"key":"materials-and-participants","label":{"ja":"材料と対象者","en":"Materials and participants"},"type":"text","text":{"ja":"悪性腫瘍 （肺がん、乳がん、胃がん、大腸・直腸がん、前立腺がん）\n心血管系疾患 （心不全、心筋梗塞，不安定狭心症、安定狭心症、不整脈、閉塞性動脈硬化症）\n脳血管障害 （脳梗塞、脳動脈瘤）\n呼吸器疾患 （間質性肺炎＆肺線維症、肺気腫、気管支喘息）\n慢性肝疾患 （C型慢性肝炎、肝硬変）\n眼疾患 （白内障、緑内障）\nその他 （てんかん、歯周病、尿路結石、ネフローゼ症候群、子宮筋腫、子宮内膜症、\n骨粗鬆症、関節リウマチ、筋萎縮性側索硬化症、花粉症、アトピー性皮膚炎、\n過敏性症候群（薬疹）、高脂血症、糖尿病、バセドウ病）\n各約190症例","en":"Cancer (Lung cancer, Breast cancer, Gastric cancer, Colorectal cancer, Prostate cancer)\nCardiovascular diseases (Heart failure, Myocardial infarction, Unstable angina, Stable angina, Cardiac arrhythmias, Arteriosclerosis obliterans)\nCerebrovascular disorders (Brain infarction, Intracranial aneurysm)\nRespiratory tract diseases (Interstitial pneumonitis & pulmonary fibrosis, Pulmonary emphysema, Bronchial asthma)\nChronic liver diseases (Chronic hepatitis C, Liver cirrhosis)\nEye diseases (Cataract, Glaucoma)\nOthers (Epilepsy, Periodontal disease, Urolithiasis, Nephrotic syndrome, Uterine myoma, Endometriosis,\nOsteoporosis, Rheumatoid arthritis, Amyotrophic lateral sclerosis, Hay fever, Atopic dermatitis,\nDrug eruptions , Hyperlipidemias, Diabetes mellitus, Basedow disease)\n\nabout 190 patients in each disease set"}},{"key":"health-status","label":{"ja":"健康状態","en":"Health status"},"type":"vocabulary","terms":[{"code":"affected","label":{"ja":"罹患","en":"Affected"}}]},{"key":"subject-count","label":{"ja":"対象者数","en":"Subject count"},"type":"number","numbers":[{"value":190,"unit":null,"high":null}]},{"key":"subject-count-type","label":{"ja":"対象者数の数え方","en":"Counted as"},"type":"vocabulary","terms":[{"code":"individual","label":{"ja":"人数","en":"Individual"}}]},{"key":"sample-description","label":{"ja":"試料説明","en":"Sample description"},"type":"text","text":{"ja":"末梢血から抽出したgDNA","en":"gDNA extracted from peripheral blood cells"}},{"key":"tissue","label":{"ja":"組織","en":"Tissue"},"type":"vocabulary","terms":[{"code":"peripheral-blood","label":{"ja":"末梢血","en":"Peripheral blood"}}]},{"key":"is-tumor","label":{"ja":"腫瘍 / 非腫瘍","en":"Tumor / normal"},"type":"vocabulary","terms":[{"code":"mixed","label":{"ja":"混在","en":"Mixed"}}]},{"key":"sample-provider","label":{"ja":"試料の入手元","en":"Sample provider"},"type":"text","text":{"ja":null,"en":null}},{"key":"experimental-method","label":{"ja":"実験方法","en":"Experimental method"},"type":"vocabulary","terms":[{"code":"genotyping-by-array","label":{"en":"Genotyping by array"}}]},{"key":"targets","label":{"ja":"測定対象","en":"Target"},"type":"text","text":{"ja":null,"en":null}},{"key":"reagents","label":{"ja":"試薬キット","en":"Reagent kit"},"type":"vocabulary","terms":null},{"key":"platform","label":{"ja":"プラットフォーム","en":"Platform"},"type":"vocabulary","terms":[{"code":"perlegen-sciences-high-density-oligonucleotide-arrays","label":{"en":"Perlegen Sciences high-density oligonucleotide arrays"}}]},{"key":"filtering","label":{"ja":"QC・フィルタリング","en":"QC and filtering"},"type":"text","text":{"ja":null,"en":null}},{"key":"analysis-methods","label":{"ja":"解析方法","en":"Analysis method"},"type":"text","text":{"ja":null,"en":null}},{"key":"variant-number","label":{"ja":"バリアント数","en":"Variant count"},"type":"number","numbers":[{"value":200000,"unit":null,"high":null,"suffix":{"ja":" SNPs (約 b129)","en":" SNPs (Approx. b129)"}}]},{"key":"policies","label":{"ja":"利用ポリシー","en":"Data use policy"},"type":"vocabulary","terms":[{"code":"nbdc-data-sharing-policy-jgap000001","label":{"ja":"NBDC データ共有ポリシー (JGAP000001)","en":"NBDC data sharing policy (JGAP000001)"}}]}]}],"fileFormats":[{"code":"xlsx","label":{"en":"XLSX"}},{"code":"zip","label":{"en":"ZIP"}}]}