{"id":"JGAD001127","research":"hum0294","url":"https://humandbs.dbcls.jp/dataset/JGAD001127","datePublished":"2026-11-02","dateModified":"2026-11-02","values":[{"key":"access-criteria","label":{"ja":"アクセス制限","en":"Access criteria"},"type":"vocabulary","terms":[{"code":"controlled-access-type-1","label":{"ja":"制限公開（Type I）","en":"Controlled-access (Type I)"}}]},{"key":"type-of-data","label":{"ja":"データの種類","en":"Type of data"},"type":"text","text":{"ja":"NGS（scRNA-seq、scTCR-seq）","en":"NGS (scRNA-seq, scTCR-seq)"}}],"experiments":[{"label":{"ja":"scRNA-seq + scTCR-seq","en":"scRNA-seq + scTCR-seq"},"values":[{"key":"materials-and-participants","label":{"ja":"試料 / 対象者","en":"Materials and participants"},"type":"text","text":{"ja":"切除不能進行・再発胃がん：12症例\n切除不能進行・再発食道胃接合部がん：2症例\n- 治療前（14検体：胃がん12、食道胃接合部がん2）、治療中（12検体：胃がん10、食道胃接合部がん2）、および増悪時（9検体：胃がん7、食道胃接合部がん2）の腫瘍組織","en":"advanced gastric cancer: 12 cases\nadvanced gastroesophageal junction (GEJ) cancer: 2 cases\n- tumor specimens at three time points: before treatment (14 samples: 12 gastric, 2 GEJ), during treatment (12 samples: 10 gastric, 2 GEJ), and at disease progression (9 samples: 7 gastric, 2 GEJ)"}},{"key":"disease","label":{"ja":"疾患","en":"Disease"},"type":"disease","diseases":[{"terms":[{"code":"C158","label":{"ja":"食道の境界部病巣","en":"Malignant neoplasm: Overlapping lesion of oesophagus"}}],"name":{"ja":"食道胃接合部がん","en":"gastroesophageal junction cancer"}},{"terms":[{"code":"C169","label":{"ja":"胃，部位不明","en":"Malignant neoplasm: Stomach, unspecified"}}],"name":{"ja":"胃がん","en":"gastric cancer"}}]},{"key":"health-status","label":{"ja":"健康状態","en":"Health status"},"type":"vocabulary","terms":[{"code":"affected","label":{"ja":"罹患","en":"Affected"}}]},{"key":"subject-count","label":{"ja":"対象者数","en":"Subject count"},"type":"number","numbers":[{"value":14,"unit":null,"high":null}]},{"key":"subject-count-type","label":{"ja":"対象者数の数え方","en":"Counted as"},"type":"vocabulary","terms":[{"code":"individual","label":{"ja":"人数","en":"Individual"}}]},{"key":"population","label":{"ja":"対象集団","en":"Population"},"type":"vocabulary","terms":[{"code":"japanese","label":{"ja":"日本人","en":"Japanese"}}]},{"key":"sample-description","label":{"ja":"試料説明","en":"Sample description"},"type":"text","text":{"ja":"腫瘍組織より単離した細胞から抽出したRNA","en":"RNA extracted from single cells isolated from tumor tissues"}},{"key":"tissue","label":{"ja":"組織","en":"Tissue"},"type":"vocabulary","terms":[{"code":"stomach","label":{"ja":"胃","en":"Stomach"}},{"code":"esophagus","label":{"ja":"食道","en":"Esophagus"}}]},{"key":"is-tumor","label":{"ja":"腫瘍 / 非腫瘍","en":"Tumor / normal"},"type":"vocabulary","terms":[{"code":"tumor","label":{"ja":"腫瘍","en":"Tumor"}}]},{"key":"sample-provider","label":{"ja":"購入試料の入手元","en":"Sample provider"},"type":"text","text":{"ja":null,"en":null}},{"key":"experimental-method","label":{"ja":"実験方法","en":"Experimental method"},"type":"vocabulary","terms":[{"code":"scrna-seq","label":{"en":"scRNA-seq"}},{"code":"sctcr-seq","label":{"ja":"scTCR-seq","en":"scTCR-seq"}}]},{"key":"targets","label":{"ja":"対象領域","en":"Target"},"type":"text","text":{"ja":null,"en":null}},{"key":"reagents","label":{"ja":"試薬キット","en":"Reagent kit"},"type":"vocabulary","terms":[{"code":"chromium-next-gem-single-cell-5-v2","label":{"en":"Chromium Next GEM Single Cell 5' v2"}}]},{"key":"fragmentation","label":{"ja":"断片化","en":"Fragmentation"},"type":"text","text":{"ja":"酵素反応","en":"Enzymatic fragmentation"}},{"key":"platform","label":{"ja":"プラットフォーム","en":"Platform"},"type":"vocabulary","terms":[{"code":"illumina-novaseq-x-plus","label":{"en":"Illumina NovaSeq X Plus"}}]},{"key":"read-type","label":{"ja":"リードタイプ","en":"Read type"},"type":"vocabulary","terms":[{"code":"paired-end","label":{"ja":"ペアエンド","en":"Paired-end"}}]},{"key":"read-length","label":{"ja":"リード長","en":"Read length"},"type":"number","numbers":[{"value":28,"unit":"bp","high":null,"suffix":{"ja":" (read1)","en":" (read1)"}},{"value":90,"unit":"bp","high":null,"suffix":{"ja":" (read2)","en":" (read2)"}}]},{"key":"policies","label":{"ja":"利用ポリシー","en":"Data use policy"},"type":"vocabulary","terms":[{"code":"nbdc-data-sharing-policy-jgap000001","label":{"ja":"NBDC データ共有ポリシー (JGAP000001)","en":"NBDC data sharing policy (JGAP000001)"}}]}]}],"dataVolume":1294498162792,"fileFormats":[{"code":"fastq","label":{"en":"FASTQ"}}]}