{"id":"JGAD001103","secondaryIds":[],"research":"hum0257","url":"https://humandbs.dbcls.jp/dataset/JGAD001103","datePublished":"2026-11-05","dateModified":"2026-11-05","values":[{"key":"access-criteria","label":{"ja":"アクセス制限","en":"Access criteria"},"type":"vocabulary","terms":[{"code":"controlled-access-type-1","label":{"ja":"制限公開（Type I）","en":"Controlled-access (Type I)"}}]},{"key":"type-of-data","label":{"ja":"データの種類","en":"Type of data"},"type":"text","text":{"ja":"NGS（RNA-seq）","en":"NGS (RNA-seq)"}}],"experiments":[{"label":{"ja":"RNA-seq","en":"RNA-seq"},"values":[{"key":"materials-and-participants","label":{"ja":"試料 / 対象者","en":"Materials and participants"},"type":"text","text":{"ja":"膵がん：11症例\n- 腫瘍組織から樹立したオルガノイド：11検体\n膵管内乳頭粘液性腫瘍 （IPMN）由来の膵がん：2症例\n- 腫瘍組織から樹立したオルガノイド：2検体\nIPMN：3症例\n- IPMN病変から樹立したオルガノイド：3検体\n非腫瘍性疾患：1症例\n- 非腫瘍性膵臓（非がん、非IPMN）由来のオルガノイド：1検体","en":"Pancreatic cancer: 11 cases\n- organoids derived from tumor tissues: 11 samples\nintraductal papillary mucinous neoplasm (IPMN): 2 cases\n- organoids derived from tumor tissues: 2 samples\nIPMN-derived pancreatic cancers: 3 cases\n- organoids derived from tumor tissues: 3 samples\nNon-tumor pancreatic tissue: 1 case\n- organoids derived from pancreatic tissue: 1 sample"}},{"key":"disease","label":{"ja":"疾患","en":"Disease"},"type":"disease","diseases":[{"terms":[{"code":"C259","label":{"ja":"膵，部位不明","en":"Malignant neoplasm: Pancreas, unspecified"}}],"name":{"ja":"膵がん","en":"pancreatic Pancreatic cancer"}},{"terms":[{"code":"D136","label":{"ja":"膵","en":"Benign neoplasm: Pancreas"}}],"name":{"ja":"膵管内乳頭粘液性腫瘍","en":"intraductal papillary mucinous neoplasm"}}]},{"key":"health-status","label":{"ja":"健康状態","en":"Health status"},"type":"vocabulary","terms":[{"code":"affected","label":{"ja":"罹患","en":"Affected"}}]},{"key":"subject-count","label":{"ja":"対象者数","en":"Subject count"},"type":"number","numbers":[{"value":17,"unit":null,"high":null}]},{"key":"subject-count-type","label":{"ja":"対象者数の数え方","en":"Counted as"},"type":"vocabulary","terms":[{"code":"individual","label":{"ja":"人数","en":"Individual"}}]},{"key":"population","label":{"ja":"対象集団","en":"Population"},"type":"vocabulary","terms":[{"code":"japanese","label":{"ja":"日本人","en":"Japanese"}}]},{"key":"sample-description","label":{"ja":"試料説明","en":"Sample description"},"type":"text","text":{"ja":"腫瘍組織および非腫瘍組織から樹立したオルガノイドより抽出したRNA","en":"RNAs extracted from organoids established from pancreatic tumors or non-tumors"}},{"key":"tissue","label":{"ja":"組織","en":"Tissue"},"type":"vocabulary","terms":[{"code":"pancreas","label":{"ja":"膵臓","en":"Pancreas"}},{"code":"organoid","label":{"ja":"オルガノイド","en":"Organoid"}}]},{"key":"is-tumor","label":{"ja":"腫瘍 / 非腫瘍","en":"Tumor / normal"},"type":"vocabulary","terms":[{"code":"mixed","label":{"ja":"混在","en":"Mixed"}}]},{"key":"sample-provider","label":{"ja":"購入試料の入手元","en":"Sample provider"},"type":"text","text":{"ja":null,"en":null}},{"key":"experimental-method","label":{"ja":"実験方法","en":"Experimental method"},"type":"vocabulary","terms":[{"code":"long-read-rna-seq","label":{"en":"Long read RNA-seq"}}]},{"key":"targets","label":{"ja":"対象領域","en":"Target"},"type":"text","text":{"ja":null,"en":null}},{"key":"reagents","label":{"ja":"試薬キット","en":"Reagent kit"},"type":"vocabulary","terms":[{"code":"ligation-sequencing-kit-sqk-lsk110","label":{"en":"Ligation Sequencing Kit (SQK-LSK110)"}}]},{"key":"fragmentation","label":{"ja":"断片化","en":"Fragmentation"},"type":"text","text":{"ja":"g-TUBE（Covaris）","en":"g-TUBE (Covaris)"}},{"key":"platform","label":{"ja":"プラットフォーム","en":"Platform"},"type":"vocabulary","terms":[{"code":"oxford-nanopore-technologies-minion","label":{"en":"Oxford Nanopore Technologies MinION"}}]},{"key":"read-type","label":{"ja":"リードタイプ","en":"Read type"},"type":"vocabulary","terms":[{"code":"single-end","label":{"ja":"シングルエンド","en":"Single-end"}}]},{"key":"read-length","label":{"ja":"リード長","en":"Read length"},"type":"number","numbers":[{"value":830,"unit":"bp","high":null,"suffix":{"ja":"（平均）","en":" (Mean)"}}]},{"key":"policies","label":{"ja":"利用ポリシー","en":"Data use policy"},"type":"vocabulary","terms":[{"code":"nbdc-data-sharing-policy-jgap000001","label":{"ja":"NBDC データ共有ポリシー (JGAP000001)","en":"NBDC data sharing policy (JGAP000001)"}}]}]}],"dataVolume":440674743806,"fileFormats":[{"code":"fastq","label":{"en":"FASTQ"}}]}