{"id":"JGAD000387","research":"hum0266","url":"https://humandbs.dbcls.jp/dataset/JGAD000387","datePublished":"2022-12-28","dateModified":"2022-12-28","values":[{"key":"access-criteria","label":{"ja":"アクセス制限","en":"Access criteria"},"type":"vocabulary","terms":[{"code":"controlled-access-type-1","label":{"ja":"制限公開（Type I）","en":"Controlled-access (Type I)"}}]},{"key":"type-of-data","label":{"ja":"データの種類","en":"Type of data"},"type":"text","text":{"ja":"NGS（scRNA-seq）","en":"NGS (scRNA-seq)"}}],"experiments":[{"label":"scRNA-seq","values":[{"key":"materials-and-participants","label":{"ja":"材料と対象者","en":"Materials and participants"},"type":"text","text":{"ja":"天疱瘡（ICD10：L10.0/L10.2）：3症例（細胞数）\n治療開始前デスモグレイン特異的B細胞（37、30、36）\n治療開始前非デスモグレイン特異的B細胞（44、40、44）\n内1例は治療開始後のデスモグレイン特異的B細胞と非デスモグレイン特異的B細胞（31、96）も含む\n健常人：3名（細胞数）\nインフルエンザHA特異的B細胞（48、36、36）\n非インフルエンザHA特異的B細胞（48、48、48）","en":"Pemphigus (ICD10: L10.0/L10.2): 3 cases (number of single cells)\nDesmoglein-specific B cell (37 , 30 , 36)\nnon-desmoglein-specific B cell (44 , 40 , 44)\nOne of the patients, desmoglein-specific B cells and non-desmoglein-specific B cells (31 , 96) after PSL treatment are also included.\n3 healthy controls (number of single cells)\nInfluenza HA specific B cell (48 , 36 , 36)\nnon-influenza HA specific B cell (48 , 48 , 48)"}},{"key":"disease","label":{"ja":"疾患","en":"Disease"},"type":"disease","diseases":[{"terms":[{"code":"L100","label":{"ja":"尋常性天疱瘡","en":"Pemphigus vulgaris"}},{"code":"L102","label":{"ja":"落葉状天疱瘡","en":"Pemphigus foliaceus"}}],"name":{"ja":"天疱瘡","en":"Pemphigus"}}]},{"key":"health-status","label":{"ja":"健康状態","en":"Health status"},"type":"vocabulary","terms":[{"code":"mixed","label":{"ja":"混在","en":"Mixed"}}]},{"key":"subject-count","label":{"ja":"対象者数","en":"Subject count"},"type":"number","numbers":[{"value":6,"unit":null,"high":null}]},{"key":"subject-count-type","label":{"ja":"対象者数の数え方","en":"Counted as"},"type":"vocabulary","terms":[{"code":"individual","label":{"ja":"人数","en":"Individual"}}]},{"key":"sample-description","label":{"ja":"試料説明","en":"Sample description"},"type":"text","text":{"ja":"抗原特異的B細胞から抽出したRNA","en":"RNAs extracted from antigen-specific B cells"}},{"key":"tissue","label":{"ja":"組織","en":"Tissue"},"type":"vocabulary","terms":[{"code":"b-cell","label":{"ja":"B 細胞","en":"B cell"}}]},{"key":"is-tumor","label":{"ja":"腫瘍 / 非腫瘍","en":"Tumor / normal"},"type":"vocabulary","terms":[{"code":"normal","label":{"ja":"非腫瘍","en":"Normal"}}]},{"key":"sample-provider","label":{"ja":"試料の入手元","en":"Sample provider"},"type":"text","text":{"ja":null,"en":null}},{"key":"experimental-method","label":{"ja":"実験方法","en":"Experimental method"},"type":"vocabulary","terms":[{"code":"scrna-seq","label":{"en":"scRNA-seq"}}]},{"key":"targets","label":{"ja":"測定対象","en":"Target"},"type":"text","text":{"ja":null,"en":null}},{"key":"reagents","label":{"ja":"試薬キット","en":"Reagent kit"},"type":"vocabulary","terms":[{"code":"smart-seq-ht-kit","label":{"en":"SMART-Seq HT Kit"}},{"code":"nextera-xt-dna-library-prep-kit","label":{"en":"Nextera XT DNA Library Prep Kit"}}]},{"key":"fragmentation","label":{"ja":"断片化","en":"Fragmentation"},"type":"text","text":{"ja":"Nextera XT DNA Library Prep Kit","en":"Nextera XT DNA Library Prep Kit"}},{"key":"platform","label":{"ja":"プラットフォーム","en":"Platform"},"type":"vocabulary","terms":[{"code":"illumina-novaseq-6000","label":{"en":"Illumina NovaSeq 6000"}}]},{"key":"read-type","label":{"ja":"リードタイプ","en":"Read type"},"type":"vocabulary","terms":[{"code":"paired-end","label":{"ja":"ペアエンド","en":"Paired-end"}}]},{"key":"read-length","label":{"ja":"リード長","en":"Read length"},"type":"number","numbers":[{"value":150,"unit":"bp","high":null}]},{"key":"policies","label":{"ja":"利用ポリシー","en":"Data use policy"},"type":"vocabulary","terms":[{"code":"nbdc-data-sharing-policy-jgap000001","label":{"ja":"NBDC データ共有ポリシー (JGAP000001)","en":"NBDC data sharing policy (JGAP000001)"}}]}]}],"dataVolume":195697385350,"fileFormats":[{"code":"fastq","label":{"en":"FASTQ"}},{"code":"txt","label":{"en":"TXT"}}]}