{"id":"JGAD000132","research":"hum0115","url":"https://humandbs.dbcls.jp/dataset/JGAD000132","datePublished":"2020-09-28","dateModified":"2021-04-19","values":[{"key":"access-criteria","label":{"ja":"アクセス制限","en":"Access criteria"},"type":"vocabulary","terms":[{"code":"controlled-access-type-1","label":{"ja":"制限公開（Type I）","en":"Controlled-access (Type I)"}}]},{"key":"type-of-data","label":{"ja":"データの種類","en":"Type of data"},"type":"text","text":{"ja":"マイクロアレイ","en":"Microarray"}}],"experiments":[{"label":"発現アレイ","values":[{"key":"materials-and-participants","label":{"ja":"材料と対象者","en":"Materials and participants"},"type":"text","text":{"ja":"SEES3にTFを導入して樹立したES細胞株（TF-hESC）：計448検体\n（116遺伝子×2株（一部1株）×2条件）","en":"TF-hESC lines: total 448 samples\n(116 genes x [1 or 2 clones] x 2 culture conditions)"}},{"key":"subject-count","label":{"ja":"対象者数","en":"Subject count"},"type":"number","numbers":[{"value":448,"unit":null,"high":null}]},{"key":"subject-count-type","label":{"ja":"対象者数の数え方","en":"Counted as"},"type":"vocabulary","terms":[{"code":"sample","label":{"ja":"検体数","en":"Sample"}}]},{"key":"sample-description","label":{"ja":"試料説明","en":"Sample description"},"type":"text","text":{"ja":"SEES3細胞に116種のTFをそれぞれ導入し、TF誘導後もしくは非誘導条件で48時間培養した細胞から抽出したmRNA","en":"mRNA extracted from TF-hESC cells under each condition"}},{"key":"cell-line","label":{"ja":"細胞株","en":"Cell line"},"type":"vocabulary","terms":[{"code":"ipsc","label":{"en":"iPSC"}},{"code":"hesc","label":{"en":"hESC"}}]},{"key":"sample-provider","label":{"ja":"試料の入手元","en":"Sample provider"},"type":"text","text":{"ja":"https://www2.brc.riken.jp/lab/cell/detail.cgi?cell_no=HES0008","en":"https://www2.brc.riken.jp/lab/cell/detail.cgi?cell_no=HES0008"}},{"key":"experimental-method","label":{"ja":"実験方法","en":"Experimental method"},"type":"vocabulary","terms":[{"code":"expression-array","label":{"en":"Expression array"}}]},{"key":"targets","label":{"ja":"測定対象","en":"Target"},"type":"text","text":{"ja":null,"en":null}},{"key":"reagents","label":{"ja":"試薬キット","en":"Reagent kit"},"type":"vocabulary","terms":[{"code":"low-input-quick-amp-labeling-kit","label":{"en":"Low Input Quick Amp Labeling Kit"}}]},{"key":"platform","label":{"ja":"プラットフォーム","en":"Platform"},"type":"vocabulary","terms":[{"code":"agilent-sureprint-g3-human-ge-v2-8x60k-microarray","label":{"en":"Agilent SurePrint G3 Human GE v2 8x60K Microarray"}},{"code":"agilent-surescan-g4900da","label":{"en":"Agilent SureScan G4900DA"}}]},{"key":"filtering","label":{"ja":"QC・フィルタリング","en":"QC and filtering"},"type":"text","text":{"ja":null,"en":null}},{"key":"normalization","label":{"ja":"正規化","en":"Normalization"},"type":"text","text":{"ja":"補正前のIntensityデータを提供","en":"Raw intensity data are provided"}},{"key":"policies","label":{"ja":"利用ポリシー","en":"Data use policy"},"type":"vocabulary","terms":[{"code":"nbdc-data-sharing-policy-jgap000001","label":{"ja":"NBDC データ共有ポリシー (JGAP000001)","en":"NBDC data sharing policy (JGAP000001)"}}]}]}],"dataVolume":15990872512,"fileFormats":[{"code":"txt","label":{"en":"TXT"}}]}